PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012726-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family G2-like
Protein Properties Length: 132aa    MW: 14405.5 Da    PI: 8.9034
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012726-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.66.9e-292070252
         G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52
                    prlrWt +LH++Fv+ave+LGG+++AtPk il++m+vkg++l+hvkSHLQk
  AUR62012726-RA 20 PRLRWTGDLHHCFVRAVERLGGEDRATPKMILQIMGVKGISLSHVKSHLQK 70
                    9*************************************************9 PP
2Myb_DNA-binding44.24.6e-142170146
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqk 46
                     r+rWT +++  +v+av++lGg+   t+k I + mg kg +l ++ks++qk
   AUR62012726-RA 21 RLRWTGDLHHCFVRAVERLGGEdraTPKMILQIMGvKGISLSHVKSHLQK 70
                     89**********************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MMEMKGRSRG VRPYVRSNAP RLRWTGDLHH CFVRAVERLG GEDRATPKMI LQIMGVKGIS  60
LSHVKSHLQK GYKQGEVSGC TSSSSSSLSL SLLLATDDDQ NLNTEINLDW NSSCRIMAAG  120
VQDVSLDLTL S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.14e-28G2-like family protein