PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62012833-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NF-YB

Protein Properties

Length: 222aa MW: 25062.1 Da PI: 6.7499

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62012833-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	174.7	9.5e-55	52	148	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdrf+Pianv+rim+k+lP +akis+daket+qecvse+isf+t+ea+++cqre+rkti+++d+lwa+++lGf+dy+epl++yl++yreleg AUR62012833-RA 52 VREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEG 146 69********************************************************************************************* PP NF-YB 96 ek 97 e+ AUR62012833-RA 147 ER 148 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MNHIRATING KVFSHDDMSH HHLNNNNGNN NFNGSSNHSV SSTDQDNNEC TVREQDRFMP 60 IANVIRIMRK ILPPHAKISD DAKETIQECV SEYISFITGE ANERCQREQR KTITAEDVLW 120 AMSKLGFDDY IEPLTLYLHR YRELEGERGS IRTCEPLLKL SRVAMDQYAA FGPVFHIGPP 180 PSHHHHGYFG GSSSMNGYLK DASIYGMYHL LLSLVVLSAN S*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	1e-72	NF-YB family protein