PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62012891-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 458aa    MW: 50036.4 Da    PI: 5.7585
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62012891-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS409.43.4e-125874422374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      +lLl+cAeavs++++e a+++L ++se a+p g++ qR+aayf eA++arl++s+ ++  alp+ +      ++ ++a+++f+ +sP++kfsh+
  AUR62012891-RA  87 LTLLLQCAEAVSADKFEDANKMLVEISEWATPFGTSAQRVAAYFSEAMSARLVSSCLGIHTALPTIPHY----QKLVSAFQVFNGISPFVKFSHF 177
                     579*********************************************************999999985....89999***************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                     taNqaI ea+++eervHiiD+di+qGlQWp L++ LasRp+gpp +R+Tg+g     s e+le+tg+rL++fAe+lg+pfef + va+++ +l+l
  AUR62012891-RA 178 TANQAIQEAFQREERVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGT----SMEALEATGKRLSDFAEKLGLPFEFIP-VAEKVGNLDL 267
                     *****************************************************....***************************.7********* PP

            GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
                     e+L+v+++Ea+aV++    h+l+d ++s ++    +L+l+++l Pkvv+vveq++++ ++sFl rf+ea++yysalfdsl a+++++seer++vE
  AUR62012891-RA 268 ERLHVSKREAVAVHWLQ--HSLYDVTGSDTN----TLWLLQRLAPKVVTVVEQDLSR-TGSFLGRFVEAIHYYSALFDSLGASYGEDSEERHVVE 355
                     ****************9..999999999999....********************99.889********************************** PP

            GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++ll+rei+nv+a  g +r  + + +++Wre+++++GF+ ++l  +aa+qa lll +++sdgy++ e+sg+l lgWkd  L+++SaWr
  AUR62012891-RA 356 QQLLSREIRNVLAVGGPSRSGEPK-FASWREKMQQSGFRGISLAGNAAAQATLLLGMFPSDGYTLVEDSGTLKLGWKDLCLLTASAWR 442
                     ******************888877.**************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    
PETTTTQAGE GILDQNPENF PNNSRDSDPA VGSSSAAKVG TEESPSSAAT PPTPTPPPSQ  60
QVTAVAKARE REEFRQRQRD EEGLHLLTLL LQCAEAVSAD KFEDANKMLV EISEWATPFG  120
TSAQRVAAYF SEAMSARLVS SCLGIHTALP TIPHYQKLVS AFQVFNGISP FVKFSHFTAN  180
QAIQEAFQRE ERVHIIDLDI MQGLQWPGLF HILASRPGGP PFVRLTGLGT SMEALEATGK  240
RLSDFAEKLG LPFEFIPVAE KVGNLDLERL HVSKREAVAV HWLQHSLYDV TGSDTNTLWL  300
LQRLAPKVVT VVEQDLSRTG SFLGRFVEAI HYYSALFDSL GASYGEDSEE RHVVEQQLLS  360
REIRNVLAVG GPSRSGEPKF ASWREKMQQS GFRGISLAGN AAAQATLLLG MFPSDGYTLV  420
EDSGTLKLGW KDLCLLTASA WRPSHAHTMS TVCTRSQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein