PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62013200-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 646aa MW: 73435.1 Da PI: 6.6556

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62013200-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	99.1	4.8e-31	70	161	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GFs+r+s+s++s+++g i++r fvC keg+r+ ++k+ +++ +r+r+ tr+gCka+l vk +++gkw+v+ + +eHnHel+p AUR62013200-RA 70 FYNSYARRIGFSTRVSSSRRSRKDGAIIQRSFVCAKEGFRNLNEKRtkDREIKRPRMITRVGCKAMLSVKIQDSGKWVVSGFCKEHNHELVP 161 9*************************************998888545677889*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 646 aa Download sequence
MENQVLNFDI ELGPGATISD DAIEIDENDI PETPFLHPTT HFSSAIEGEL LDLEPYDGME 60 FESEEAAKAF YNSYARRIGF STRVSSSRRS RKDGAIIQRS FVCAKEGFRN LNEKRTKDRE 120 IKRPRMITRV GCKAMLSVKI QDSGKWVVSG FCKEHNHELV PPDQVHCLRS HRQISGPAKT 180 LIDTLQAAGL GPRRIMSALI KEYGGISKVG FTEVDCRNYM RNNKQRSIEG DFQLLIEYLN 240 QMKLENSGFY FAVQGDGDHN SSDFHKCVNL PESVDEFESC WLSVLDRYDL RDNEWLQLIY 300 SARRQWVPVY LRDAFFAEMS VTQRSDSMNS YFDGYVNAST NLSQFFKLYE KALESRNEKE 360 VRADFETIST PPALKTPSPM EKQVSGLYTR KVFMRFQEEL VGTLTYMATK TDDDGQVITY 420 QVAKYGEDHK VFCVRFNVLE MRATCSCQMF EFSGLLCRHA LAVFRVTNIL TLPSHYILKR 480 WTRNAKSSVM LDNPHGSTVT SYLESHTVRY NSLRHEAFKF VDEAASTSET YDVAMAALEE 540 AAEKVSQALK SVRKSSMANG PVKDLMRGGS GNKSSHDNGM SLSQQVSEDC MDQKIRELSE 600 ELESANRKCE VYRANLLSVL KDIEDHKQLL AVKVHNVKLS LKNAI*

Sequence ? help Back to Top

Protein Sequence Length: 646 aa Download sequence

MENQVLNFDI ELGPGATISD DAIEIDENDI PETPFLHPTT HFSSAIEGEL LDLEPYDGME  60
FESEEAAKAF YNSYARRIGF STRVSSSRRS RKDGAIIQRS FVCAKEGFRN LNEKRTKDRE  120
IKRPRMITRV GCKAMLSVKI QDSGKWVVSG FCKEHNHELV PPDQVHCLRS HRQISGPAKT  180
LIDTLQAAGL GPRRIMSALI KEYGGISKVG FTEVDCRNYM RNNKQRSIEG DFQLLIEYLN  240
QMKLENSGFY FAVQGDGDHN SSDFHKCVNL PESVDEFESC WLSVLDRYDL RDNEWLQLIY  300
SARRQWVPVY LRDAFFAEMS VTQRSDSMNS YFDGYVNAST NLSQFFKLYE KALESRNEKE  360
VRADFETIST PPALKTPSPM EKQVSGLYTR KVFMRFQEEL VGTLTYMATK TDDDGQVITY  420
QVAKYGEDHK VFCVRFNVLE MRATCSCQMF EFSGLLCRHA LAVFRVTNIL TLPSHYILKR  480
WTRNAKSSVM LDNPHGSTVT SYLESHTVRY NSLRHEAFKF VDEAASTSET YDVAMAALEE  540
AAEKVSQALK SVRKSSMANG PVKDLMRGGS GNKSSHDNGM SLSQQVSEDC MDQKIRELSE  600
ELESANRKCE VYRANLLSVL KDIEDHKQLL AVKVHNVKLS LKNAI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-180	FAR1 family protein