PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62013224-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 171aa    MW: 19014.9 Da    PI: 10.0083
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62013224-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.5e-081361655
                    HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    ++s f++L +llP++     +K +K +++e+Av+YIk Lq
  AUR62013224-RA  1 MRSMFATLHSLLPQL----TPKADKTTVVEEAVNYIKTLQ 36
                    6799**********9....69******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MRSMFATLHS LLPQLTPKAD KTTVVEEAVN YIKTLQNTVK RLEIQKIEQN QGLPPIMSSS  60
FPIGPSVPAN SRLATLPTTR EAFMANQVSL MNNNNNYSTG SSRAVKIKTW TASNVVLSIC  120
GNVAQYAVYA TKKPVLFTTI CSVLEKYAME IFAANIYTDD ANRSHFMFQT R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.13e-30bHLH family protein