PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62013352-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 224aa    MW: 25369.5 Da    PI: 8.2375
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62013352-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-17553153
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                    ++++GVr++  +g+Wv+eIr+p        kr++lg+f+tae  aka+++a+  +
  AUR62013352-RA  5 KKFRGVRQRQ-WGSWVSEIRHP-----LlkKRVWLGTFDTAEAEAKAYDQAAILM 53
                    59*****999.**********8.....335*********************9766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MVHSKKFRGV RQRQWGSWVS EIRHPLLKKR VWLGTFDTAE AEAKAYDQAA ILMCGRNAKS  60
NFPLSQNINE LEELNYNKNK LNYKGSNPNS LKSSSSNTHE KLSQALHAKL CKSNKVPSSS  120
LTCLRLDTEN SHIGVWQKRA GPSPNSKWVK TVTFEDNKNI KVGDIDHEEC NKEQEGQEER  180
VTSPSIGTFG IVHDHDHVHV LDEEEKVALQ MIEELLSRNY CSN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.11e-45ERF family protein