PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62013510-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Dof
Protein Properties Length: 256aa    MW: 28010.4 Da    PI: 4.2926
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62013510-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof116.88.4e-371571662
          zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                     +cprC s+ntkfCyynnyslsqPr+fCk+CrryWt+GG+lrnvPvGgg+rk+++s+
  AUR62013510-RA 15 PNCPRCASSNTKFCYYNNYSLSQPRFFCKGCRRYWTRGGSLRNVPVGGGCRKSRRSR 71
                    58***************************************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MTSDSRWRVS INPAPNCPRC ASSNTKFCYY NNYSLSQPRF FCKGCRRYWT RGGSLRNVPV  60
GGGCRKSRRS RSTKGFSSGL TGLRSDNNPS SNSSSSCSES GCPDIDMAAV FAKFLNPGQE  120
NVNDEINEAT TNTSSEASYG SPISSSCGLE NGLEYQKLSD DFLDLVPSDH RQLQADEVNQ  180
GFINPDLASF DDIIEDVFWS EDSDLSGFTW QPIAQMQEFD SSLPPAHESQ TSADLFSSDN  240
WSYFDTAGLE AFSGP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.13e-30Dof family protein