PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62013541-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 347aa MW: 39157.4 Da PI: 7.8121

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62013541-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.1	7.1e-53	13	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+ +yLkkkv+ + ++l +vi+evd++k+ePwdL+ ++ + ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ AUR62013541-RA 13 VPPGFRFHPTDEELLYYYLKKKVSYEAIDL-DVIREVDLNKLEPWDLKDrcRIGSgPQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAI 106 69**************************.9***********943444442456********************************** PP NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + + +g++ktLvfy+grap+g+ktdW+mheyrl AUR62013541-RA 107 YLGnNAKRIGMRKTLVFYTGRAPHGHKTDWIMHEYRL 143 9756677**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MMPGNGGNGQ ISVPPGFRFH PTDEELLYYY LKKKVSYEAI DLDVIREVDL NKLEPWDLKD 60 RCRIGSGPQN EWYFFSHKDK KYPTGTRTNR ATAAGFWKAT GRDKAIYLGN NAKRIGMRKT 120 LVFYTGRAPH GHKTDWIMHE YRLNDEDPQL QQEDGWVVCR VFKKKNHGRG LHSELQHEDD 180 YDNPNPTNNH PTSSHMIKPS TNPTTSTILF PPRQHGYNVQ PLMFPNNYYN PDYTFDGAMH 240 LPQLASSDTL SAAGGSTLFT TMDNILRLST SAGGLINTQQ LLANGGEWGF LDKLLANYQS 300 LDXXXXXXXX XXDPSHNKIV AGAIANHDIL GMSSTSALQH QQHKFC*

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MMPGNGGNGQ ISVPPGFRFH PTDEELLYYY LKKKVSYEAI DLDVIREVDL NKLEPWDLKD  60
RCRIGSGPQN EWYFFSHKDK KYPTGTRTNR ATAAGFWKAT GRDKAIYLGN NAKRIGMRKT  120
LVFYTGRAPH GHKTDWIMHE YRLNDEDPQL QQEDGWVVCR VFKKKNHGRG LHSELQHEDD  180
YDNPNPTNNH PTSSHMIKPS TNPTTSTILF PPRQHGYNVQ PLMFPNNYYN PDYTFDGAMH  240
LPQLASSDTL SAAGGSTLFT TMDNILRLST SAGGLINTQQ LLANGGEWGF LDKLLANYQS  300
LDXXXXXXXX XXDPSHNKIV AGAIANHDIL GMSSTSALQH QQHKFC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79580.1	4e-86	NAC family protein