PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62013624-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family LBD
Protein Properties Length: 115aa    MW: 12312.2 Da    PI: 8.6473
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62013624-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26098.94.9e-31351131087
          DUF260  10 rkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqql 87 
                      kC+ +C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ar+rdPvyG+v++i++lqqq+
  AUR62013624-RA  35 GKCVVGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQV 113
                     59*************9989**********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
MPLTDEFSPF SFGWGIKVRP YGRSSGVGSS GREGGKCVVG CIFAPYFDSE QGAAHFAAVH  60
KVFGASNVSK LLLHIPVHKR LDAVVTICYE AQARLRDPVY GCVAHIFALQ QQVG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45420.12e-48LBD family protein