PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62013714-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 242aa    MW: 27121.3 Da    PI: 5.8941
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62013714-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.73e-094321444
                     HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrw 44
                     ++  ++G++ W++Ia +m  gRt++++k++w
   AUR62013714-RA  4 ELQGEFGNK-WAKIATYMA-GRTDNDVKNFW 32
                     566689***.*********.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MVIELQGEFG NKWAKIATYM AGRTDNDVKN FWSSRQKRLA RLLHSQSPTR IKKKHKSSAS  60
TSKDRPHFRE VSKNSSMEGE SSSKAQSLNS SSNSSKGKNS MELIPFPGSI DHSCPCFEAN  120
NATCLDPIPL NTYYNHTDLQ LLEMPSFPSI PPFQTDFPFL PETQELIDRL DYSFFAPFGY  180
INEPALINDG VHLFSCFGGG GMNGETRVKR EDNHAAPDSF FDDFPSDVFD EIEPLPSPPR  240
W*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.14e-21MYB family protein