PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62013882-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 228aa    MW: 26967.8 Da    PI: 8.9138
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62013882-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1652.1e-2035126290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtkleleHnHela 90 
                     fYn+YAk+ GF vrk++s ++  +g++++r+f+C + gk+  +  + +k +r++++++++Cka+++++++k      ++w+vtk +++HnH + 
  AUR62013882-RA  35 FYNKYAKHHGFVVRKDRSDTR--HGKTIRRDFYCHCGGKKPLKVVDFSKPQRNKESSKCDCKAHMRITLKKcfgifPEEWHVTKYSKQHNHVML 126
                     9***************98887..8889*******************99*********************998887789*************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MLDFDLNEPF IEEENNDDEP FIGQTFETQE EAFVFYNKYA KHHGFVVRKD RSDTRHGKTI  60
RRDFYCHCGG KKPLKVVDFS KPQRNKESSK CDCKAHMRIT LKKCFGIFPE EWHVTKYSKQ  120
HNHVMLPPEA MRFLPSNRNI NLEDEKKILL FKEAGLSVRQ IIRVLELEKN VGHSELPFIQ  180
KDVRNLFGRV KRLLGANDSK SLLEYMKFAN EENNKFQYAY TDDEKRR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.16e-48FAR1 family protein