PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62014102-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

DBB

Protein Properties

Length: 473aa MW: 52941 Da PI: 6.2881

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62014102-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18	5.8e-06	2	44	3	39
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 e++C+ ++ +C+ + llC +C + H+ H++ AUR62014102-RA 2 EKTCEFCGAPGPVVYCQADAALLCLSCDAKVHSAnalfgrHSR 44 679***999****************965677777765 PP
2	zf-B_box	16.8	1.4e-05	46	83	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg...Ht 38 C+ ++e++++ C d +llC+dC + Hk H+ AUR62014102-RA 46 LLCDSCKENPASVRCLDHLMLLCQDCDSFLHKCfahHK 83 68****************************96577555 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MEKTCEFCGA PGPVVYCQAD AALLCLSCDA KVHSANALFG RHSRSLLCDS CKENPASVRC 60 LDHLMLLCQD CDSFLHKCFA HHKKLMIGSF TGCPSVKQFA ELWGFDVNDL HQFSTVESAT 120 STASLDTERG SCSQQHKKLS NHQREQNNGL ILHQLLELKN LQLTEGDNQK KSLRHTGEYV 180 TSSSINSNSG TILLNERLKQ QSKEFNKITN ELQSLDKSNQ VLNGEHFPSP ISQLDISSSV 240 ADPFWQHNKS PVDNDQFWSQ NLQDLGICQE FGSIDDFNMP DVDVTFRNFE DLLTGDPDLT 300 RALIEDDDPM SSDTEKASMN KLDNSLIETT QETAATLESI NKHVTFMKEA NPSDHVIRGL 360 SRSVGNSPHP FKYSRSATFT CSRLCAESCR SDFLNSESSG NFRRSESSNN VEELHDLEIM 420 EGLESSIRIS KDKKKTQMHG KKTQLAPRKA RTDLHKKNKS RYAKLQGYDS DQ*

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MEKTCEFCGA PGPVVYCQAD AALLCLSCDA KVHSANALFG RHSRSLLCDS CKENPASVRC  60
LDHLMLLCQD CDSFLHKCFA HHKKLMIGSF TGCPSVKQFA ELWGFDVNDL HQFSTVESAT  120
STASLDTERG SCSQQHKKLS NHQREQNNGL ILHQLLELKN LQLTEGDNQK KSLRHTGEYV  180
TSSSINSNSG TILLNERLKQ QSKEFNKITN ELQSLDKSNQ VLNGEHFPSP ISQLDISSSV  240
ADPFWQHNKS PVDNDQFWSQ NLQDLGICQE FGSIDDFNMP DVDVTFRNFE DLLTGDPDLT  300
RALIEDDDPM SSDTEKASMN KLDNSLIETT QETAATLESI NKHVTFMKEA NPSDHVIRGL  360
SRSVGNSPHP FKYSRSATFT CSRLCAESCR SDFLNSESSG NFRRSESSNN VEELHDLEIM  420
EGLESSIRIS KDKKKTQMHG KKTQLAPRKA RTDLHKKNKS RYAKLQGYDS DQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	1e-22	CO-like family protein