PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62014191-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 568aa    MW: 62043 Da    PI: 4.7079
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62014191-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS410.41.7e-1252225651359
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv++L++cAea++++++ la+alL+++  la+++  +m+++a+yf+eALa+r+++        l p    + n s+ l++   f+e++P+lkf+h
  AUR62014191-RA 222 LVHTLMACAEAIEQQNMGLAEALLKQIGFLAASQVGSMRKVATYFAEALARRVYK--------LCPDVPYDGNLSDMLQM--HFYETCPYLKFAH 306
                     689***************************************************9........33333333456666555..5************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taNqaIlea++g+++vH+iDf++++G+QWpaL+qaLa R+egpp +R+Tg+g+p+++++++l+e+g++La+fA++++++fe++ +va++l+dle
  AUR62014191-RA 307 FTANQAILEAFSGKKKVHVIDFSMKEGMQWPALMQALALRREGPPAFRLTGIGPPAPDNSDRLQEVGWKLAQFADSIQIQFEYRGFVANSLTDLE 401
                     *********************************************************************************************** PP

            GRAS 191 leeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                        L+++p  E++aVn+v++lhrll+++++ e+    v+ l+k+++P +v+vveqea+hn++ Fl+rf e+l+yys+lfdsle+ +   ++++++
  AUR62014191-RA 402 SALLDLRPeTEVVAVNSVFELHRLLARPGAAEK----VMGLMKEVNPVIVTVVEQEANHNGPAFLDRFNESLHYYSTLFDSLESCV---DSQDKM 489
                     ********9********************9999....************************************************7...888899 PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv 359
                     +++++lgr+i+nvvaceg +r+erhetl++Wr+r+++aGF pv+++++a kqa+ ll  ++ +dgy vee++g+l+
  AUR62014191-RA 490 MSEVYLGRQICNVVACEGVDRVERHETLAQWRNRFGSAGFAPVHIGSNAFKQASVLLDYFAgGDGYGVEENDGCLM 565
                     99999*********************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 568 aa     Download sequence    
MKRELPFTNP EPSTGGKPPV SGKSKMWEDQ NDAGVDELLA VLGYKVRSSD MAEVAQKLEQ  60
LEQAMGNVRE DGLSQLASET VHYNPSDLST WLESMLSEFN PCTTFDDDSS SSQILLPSPI  120
GSVVDPIVNP TPQSSIRFSS DPYSDYDLKA IPGKAILTPP SPNTTSSSSS REAKRLKASN  180
YTAASATATA TVSNPSSSKL TANSAVSRPV VLVDSQENGV RLVHTLMACA EAIEQQNMGL  240
AEALLKQIGF LAASQVGSMR KVATYFAEAL ARRVYKLCPD VPYDGNLSDM LQMHFYETCP  300
YLKFAHFTAN QAILEAFSGK KKVHVIDFSM KEGMQWPALM QALALRREGP PAFRLTGIGP  360
PAPDNSDRLQ EVGWKLAQFA DSIQIQFEYR GFVANSLTDL ESALLDLRPE TEVVAVNSVF  420
ELHRLLARPG AAEKVMGLMK EVNPVIVTVV EQEANHNGPA FLDRFNESLH YYSTLFDSLE  480
SCVDSQDKMM SEVYLGRQIC NVVACEGVDR VERHETLAQW RNRFGSAGFA PVHIGSNAFK  540
QASVLLDYFA GGDGYGVEEN DGCLMET*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein