PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62014365-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 277aa    MW: 29970.1 Da    PI: 4.9923
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62014365-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.94.2e-16149185135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp +Rrgp+g++tLCnaCGl+++ kg+
  AUR62014365-RA 149 CQHCGISEndTPAMRRGPSGPRTLCNACGLMWANKGT 185
                     ******999*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MAANPKPLQS RPYEGEVPVD GEYSGESDGD DSMEDDGVDE DQTVQAVLLL LGERETHAGV  60
PTTDESAFGQ ENRVTGSPVR KSIISHRIAS LVRFREKRKE RCFDNKIRMH RKNGQFASLR  120
EGSASSNLEA KKNLVVGRTL GQDTVSNKCQ HCGISENDTP AMRRGPSGPR TLCNACGLMW  180
ANKGTPVDSK PSIVEENSLA NPCKLRTPKG NSSAVTIAYV NSFAKPHKEN SHRIADATSM  240
LTEIAADSSG NFDKEDTMAE LDDSSETDVD IPTNSD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-38GATA family protein