PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62014407-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family BBR-BPC
Protein Properties Length: 334aa    MW: 37401.3 Da    PI: 9.6712
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62014407-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind382.56.7e-11713331301
       GAGA_bind   1 mdddgsre..rnkg.yyepa...aslkenlg.lqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllve 88 
                     mdd+g+re  r+k+ +y+p      +++ ++ +++ms++aerda+i+ern+a+ ek++a+ erdma +qrd+a++ern+a++erdn+l++l++++
  AUR62014407-RA   1 MDDNGHREngRHKPeMYKPPhsqWLMQQPQSmKHIMSIMAERDAAIQERNMAINEKNKALEERDMAIMQRDTAMQERNEAFMERDNALATLQFRQ 95 
                     9*****999*****99995544333444444157************************************************************* PP

       GAGA_bind  89 nsla..salpvgvqvlsgtksidslqq.lse.pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvk 179
                     ns++  +++p+++q+++g+k++++ qq +++ p++++ +++ re +  +alp+++ a+e+ + +k+k      +pke+ a +++kk++ks +k k
  AUR62014407-RA  96 NSMNgsNSCPPSCQISRGVKHMHHPQQhMQHpPHVGEASYDGREVQVPDALPLTSVAPESAKPRKVK------RPKEPSAASPNKKTSKSGRKGK 184
                     **99999******************99544479************9999999998888877776666......7888888888888888888888 PP

       GAGA_bind 180 kesader...........................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvs 247
                     +e++d +                            k+++k  dl+ln+v++Dest+P+PvCsCtG+ rqCYkWGnGGWqS+CCttt+SvyPLP++
  AUR62014407-RA 185 REGEDLNkimfsksqewkgmpdmdgddgfkqlggPKSDWKGPDLGLNQVAFDESTMPPPVCSCTGVYRQCYKWGNGGWQSSCCTTTMSVYPLPAV 279
                     88888445888889999****************************************************************************** PP

       GAGA_bind 248 tkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     +++r+aR++grKmS++af+klL++Laa+G+dls+pvDLkdhWAkHGtn+++tir
  AUR62014407-RA 280 PNKRHARVGGRKMSGSAFSKLLSRLAADGHDLSTPVDLKDHWAKHGTNRYITIR 333
                     *****************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MDDNGHRENG RHKPEMYKPP HSQWLMQQPQ SMKHIMSIMA ERDAAIQERN MAINEKNKAL  60
EERDMAIMQR DTAMQERNEA FMERDNALAT LQFRQNSMNG SNSCPPSCQI SRGVKHMHHP  120
QQHMQHPPHV GEASYDGREV QVPDALPLTS VAPESAKPRK VKRPKEPSAA SPNKKTSKSG  180
RKGKREGEDL NKIMFSKSQE WKGMPDMDGD DGFKQLGGPK SDWKGPDLGL NQVAFDESTM  240
PPPVCSCTGV YRQCYKWGNG GWQSSCCTTT MSVYPLPAVP NKRHARVGGR KMSGSAFSKL  300
LSRLAADGHD LSTPVDLKDH WAKHGTNRYI TIR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-134BBR-BPC family protein