PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62014436-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

DBB

Protein Properties

Length: 326aa MW: 35728.9 Da PI: 6.7185

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62014436-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.3	1.4e-07	4	45	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg.......Htv 39 C+ +++ke++ fC ++ lC+ C + H+ H++ AUR62014436-RA 4 QCDVCSKKEASVFCSADEAALCDVCDHKVHHAnklaskhHRF 45 7****************************6445888886766 PP
2	zf-B_box	23.3	1.3e-07	56	92	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 + C+ ++ek++ +fC++++ lC++C l H Ht AUR62014436-RA 56 PLCDICQEKRALIFCQQDRAILCRECELPLHTAneHT 92 68************************99999445664 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MKIQCDVCSK KEASVFCSAD EAALCDVCDH KVHHANKLAS KHHRFSLLHP STSSFPLCDI 60 CQEKRALIFC QQDRAILCRE CELPLHTANE HTEKHNRFLL TGIKLSAVIS DNTKSTDTVT 120 ASKGIGGYIV PDFKSAKKPT SVSSEKTLNS SASLVTNSNS NSSPDSSNNN QLNCGGSTSN 180 ISEYLIDMLP GWHFEDLLVD SAAPFGFSKN TCNNQLGIEV NEDVLSFFDV ENEKELTSSS 240 TNSENFWVPQ AAITSNMFGQ TTSELHQITN ASIYGTKKQQ QSQQTSVTAT MKLNIKYLKD 300 DAFTVPQIIT NNNSSLGSKR TRPSW*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	1e-72	DBB family protein