PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62014445-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

SRS

Protein Properties

Length: 171aa MW: 17896.8 Da PI: 6.5194

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62014445-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	91.8	1.5e-28	15	87	82	154
DUF702 82 kqsalsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +++ ++s l+ a+++ le+ ++P+ev+s+avfrcvrvs +dd +e++aYqtav+igGh+fkGiLydqG+e+ AUR62014445-RA 15 RENRSNSRVLTAANTTAGLEVGNFPPEVNSPAVFRCVRVSPMDDPDEQFAYQTAVNIGGHLFKGILYDQGPET 87 3444455566778888999****************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MMRSSVGIGG EKRTRENRSN SRVLTAANTT AGLEVGNFPP EVNSPAVFRC VRVSPMDDPD 60 EQFAYQTAVN IGGHLFKGIL YDQGPETRYG GGESSSGGRS QQHSLMLTAA TTTTDLMGTV 120 GSGSTNNNTT TATATASLLD PMGTNNNSSI YPTPINAFLA GTQFFPPPRS *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	9e-32	SRS family protein