PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62014452-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 245aa    MW: 26854 Da    PI: 6.3532
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62014452-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.91.4e-194190255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     ykGVr++  +g+WvAeIr+p   + r +rf+lg+f t  eAa a++aa++kl+g
  AUR62014452-RA 41 TYKGVRQRT-WGKWVAEIREP---N-RgARFWLGTFNTSHEAALAYDAAARKLYG 90
                    69****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MLKSKLGLGE KKQGKKHQVC QASSRKGCMR GKGGPENALC TYKGVRQRTW GKWVAEIREP  60
NRGARFWLGT FNTSHEAALA YDAAARKLYG TDAKLNLPEV FPHQLPNLAQ THVQARVQAR  120
GQVRIPCYQN GYNLCCLSEN SSLSGASDLS FPIEETNSTS TITDSTTTSV ESFGENEVGV  180
NHGLWENSNP SLPELDDSLW AETAMTLGFP PRVIDPQPEL SISDEPGLLS GNLYDDSFQF  240
LWSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.16e-40ERF family protein