PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62014537-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB

Protein Properties

Length: 200aa MW: 22828.4 Da PI: 4.2825

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62014537-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.5	3.6e-09	8	55	4	47
S-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 WT e d+ + a +++ + W++Ia+ ++ ++t +++k +++ + AUR62014537-RA 8 WTWEQDKAFETALAMHFEDyseaKWAKIASQIPGNKTIEDVKQHYHVL 55 ***************99************************976 PP
2	Myb_DNA-binding	30.6	8e-10	98	135	2	39
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 ++W++ E+ +++ + ++G+g+Wk+I++++ k+R++ q AUR62014537-RA 98 QPWSEAEHRQFLLGLDRYGKGDWKSISKEFVKTRSATQ 135 79********************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MENSSSLWTW EQDKAFETAL AMHFEDYSEA KWAKIASQIP GNKTIEDVKQ HYHVLFEDIM 60 AIESGMVPIP SYTPSGRAHN FEVPVTEEEY TWESRKGQPW SEAEHRQFLL GLDRYGKGDW 120 KSISKEFVKT RSATQGNEMN SAINQAMFQE GFVEVQPMQQ QVPVVVPQEY MSPPESWCLE 180 DELAADFNVN ECSSQLPPL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	1e-35	MYB family protein