PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62014614-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 245aa    MW: 27421.2 Da    PI: 6.7057
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62014614-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.32.8e-0884134454
                     HHHHHHHHHHHHHHHH...HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsa...feeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE++RRd++N++   f eL e+l +    +++K +Ka+iL+ A++ +k L
  AUR62014614-RA  84 SKACREKQRRDHLNERhvqFLELSEILESG---TKPKFDKAAILTDAIRQVKLL 134
                     6789**********976669*********9...9**************977765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MESLEDEEFD LNWVCCLLDD IPSTCCDSSA MQPDIPLPIA RFDSFPSSTF LSEATQDSIE  60
SLYGFDVCCR KRVRVGSVTA SSSSKACREK QRRDHLNERH VQFLELSEIL ESGTKPKFDK  120
AAILTDAIRQ VKLLREETSN LTSQNGELKE KINELKVKKK ALRGEKHRLV SEKEKLEQRI  180
KSVASHPSLH FHPTSVPSSY AIPCQAVGGK LMPLINYSGV PFWQFAPQAA FDTSQDHVFH  240
PPVA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-48bHLH family protein