PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62014700-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB

Protein Properties

Length: 362aa MW: 40994.5 Da PI: 5.6578

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62014700-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.4	3.9e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W+t ++ g+ R++k+c++rw +yl AUR62014700-RA 14 KGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.5	2.7e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ AUR62014700-RA 67 RGRFSFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MGRAPCCDKN GLKKGPWTPE EDQKLIDYIQ KHGYGNWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHSPRL DLLDLSSLLN NSSFYNNTSQ SSQMNMSRLL GMQPMVNPDL LKLATSLLSN 180 QRQNLQDYQG NNDFTSNAQM QNNFNPMVQT NATRPCVPYF DEAQLMEPNF EQYPTSISNF 240 DAQNFDQWQS SGLPMSDGLV NIQPTNFGYY GSDQTFMDPS LSDNSTFQSN ISSHSNFMSY 300 APSVMSTPSS SPTHLNSGSN STTYVNSSGT EDEPESYSSD MIKFEIPDFL DVNQFLLAQT 360 N*

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MGRAPCCDKN GLKKGPWTPE EDQKLIDYIQ KHGYGNWRTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHSPRL DLLDLSSLLN NSSFYNNTSQ SSQMNMSRLL GMQPMVNPDL LKLATSLLSN  180
QRQNLQDYQG NNDFTSNAQM QNNFNPMVQT NATRPCVPYF DEAQLMEPNF EQYPTSISNF  240
DAQNFDQWQS SGLPMSDGLV NIQPTNFGYY GSDQTFMDPS LSDNSTFQSN ISSHSNFMSY  300
APSVMSTPSS SPTHLNSGSN STTYVNSSGT EDEPESYSSD MIKFEIPDFL DVNQFLLAQT  360
N*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-108	MYB family protein