PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62014828-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 159aa    MW: 17302.1 Da    PI: 4.6602
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62014828-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.42.3e-07146855
                    HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    +E+ RR+++++  ++L +l+P+ +   +s      +    A++YI++Lq
  AUR62014828-RA  1 MEKDRRNHMKNLCSQLNSLVPQdP---SSYPRAVPDQIGDATNYIRQLQ 46
                    6*********************66...88889999*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MEKDRRNHMK NLCSQLNSLV PQDPSSYPRA VPDQIGDATN YIRQLQENVE NLRQTRDELQ  60
GGGGSSGSGG GYSTNSPVQI EVNENGSALE VTLVTGLECQ FVFTEAIRIL HEENAEVVNA  120
SYSVAENIVF HTIHAQLGEA ASSNAVARIT QRLKNFEL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-29bHLH family protein