PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62014829-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 180aa    MW: 20094.9 Da    PI: 9.6565
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62014829-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.52e-071766455
                    HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                      + +E+ RR+ ++  ++eL +l+P  +    s      +    A++YIk+L+
  AUR62014829-RA 17 DRKTVEKDRRNTLKILYSELNTLIPRdD---ASSPKAIPDQIDDATNYIKQLK 66
                    56889*********************66...555566789999********95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MMSNSAKSIK SSSTKRDRKT VEKDRRNTLK ILYSELNTLI PRDDASSPKA IPDQIDDATN  60
YIKQLKSNIE NLKQTRDNIL GVGRVSSSRT SYYSKNSPVQ IEVRLNGSAL LVTLITGLEC  120
QFVFTEAIRI LHEENIEVVN ANYCVTGNIV LHTIHAQIGE AVTTDTVARI TQRLKKFEL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.16e-30bHLH family protein