PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62014911-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 158aa    MW: 17496.6 Da    PI: 10.1786
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62014911-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.2e-1964115256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +g+++AeIrd + ng  +r +lg+f taeeAa a+++a+ k++g+
  AUR62014911-RA  64 HYRGVRRRP-WGKYAAEIRDSTRNG--ARLWLGTFVTAEEAALAYDRAAFKMRGA 115
                     7********.**********44465..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MPQTELPLNE NDSQDMVLYQ VLNEANNTMN NLYQQQYHPQ NIAKRNMTSS TPTTTISGGI  60
AKRHYRGVRR RPWGKYAAEI RDSTRNGARL WLGTFVTAEE AALAYDRAAF KMRGAKALLN  120
FPAHIGKSVS GDFVGLINSY HPSNFVASTS NSSSQQV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.11e-28ERF family protein