PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62014922-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 242aa    MW: 27976.7 Da    PI: 8.585
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62014922-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.72.6e-103386198
                    E-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3 61 ltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                    ++ GW++Fv+++g++++D++vF++ g+s+f  +v++f+
  AUR62014922-RA  3 FSHGWEKFVSDHGIEVNDILVFHYAGDSSF--KVSIFN 38
                    678***********************9999..999986 PP
2B354.42.2e-17132226498
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgr.sefelvvk 95 
                     +l p +v +  +l+lpkk a eh+    +s++++l+    rsW v ++ +k+ ++  +++  +Wk+Fv +n+L+e D++vF+l+++     ++v 
  AUR62014922-RA 132 TLRPTHVYRGFMLTLPKKWAIEHMVH--GSQDVKLQV-GDRSWIVGYRLTKSHNTvvHYFNPNWKRFVLDNNLEEHDSCVFELIQKgCLSVFNVY 223
                     67899999***************744..566788665.77********999999999**************************987555556777 PP

                     EE- CS
              B3  96 vfr 98 
                     +fr
  AUR62014922-RA 224 IFR 226
                     777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MKFSHGWEKF VSDHGIEVND ILVFHYAGDS SFKVSIFNGE NCCEKEGSHF ASNTSSSSQN  60
VTCSSSLHFK RAGDNNGLEK TSRTRICYVF NQREPTEEEK ERAVEKATRF MNTKRYTERE  120
NKIPSPPMLQ ITLRPTHVYR GFMLTLPKKW AIEHMVHGSQ DVKLQVGDRS WIVGYRLTKS  180
HNTVVHYFNP NWKRFVLDNN LEEHDSCVFE LIQKGCLSVF NVYIFRAIDE IVPLTRSSFR  240
P*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.15e-26B3 family protein