PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62014973-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 245aa    MW: 27454.4 Da    PI: 9.9016
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62014973-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12.1e-1065107855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      Er+RR r+++++  Lr l+P+      +K++Ka+i+  Av Y+++Lq
  AUR62014973-RA  65 SERKRRGRMKEKLYALRALVPNI-----TKMDKASIVGDAVLYVQDLQ 107
                     6*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MKSLRVNHSV NVGVDSHEED EDEDGGPWLA HRKKMKAGEH SSATTKNTSG SSKKGKLDRS  60
RTLVSERKRR GRMKEKLYAL RALVPNITKM DKASIVGDAV LYVQDLQMQS KKLKSQIEGL  120
ESSLKAAERS QGYADTPKKN ASIDNFLPVC KMIVQMDVLQ IEEREFYVKV VSNKGQGVAA  180
SLYKALDSLT TFTIRNSSLS TLYEQFVLTF TLNVAKCREE FNLPNMKVWI SGAFLNQGFE  240
FQCF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.19e-75bHLH family protein