PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62015063-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 501aa MW: 55190.4 Da PI: 5.9737

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62015063-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.1	1e-29	44	100	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vkg+e+ rsYY+C++++C+vkk+vers+ d+++++i Y geH+h AUR62015063-RA 44 EDGYNWRKYGQKNVKGNEYIRSYYKCSHPNCQVKKQVERSQ-DGRITDINYLGEHDHA 100 7**************************************.*************7 PP
2	WRKY	107.5	6.5e-34	215	273	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK+vkg+++prsYYrC+++gCpvkk+ver+++dpkvv++tYegeH+h+ AUR62015063-RA 215 VNDGFRWRKYGQKMVKGNPNPRSYYRCSTTGCPVKKHVERASHDPKVVITTYEGEHDHS 273 58********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MVTQEENAVL VSPKDKLEQR LSPDSTINAS STDREAIVPE KPSEDGYNWR KYGQKNVKGN 60 EYIRSYYKCS HPNCQVKKQV ERSQDGRITD INYLGEHDHA KPHSDPQVSV PSLLSVKVQI 120 PDCPPAADED KPSDVQALAT GHFQKVDLCE HAIVKVADDA TPVPLTPSSQ SRDDHSENFT 180 LKRRKRSIDG GDNTAEKPSH ESRIVVHTVS EVDIVNDGFR WRKYGQKMVK GNPNPRSYYR 240 CSTTGCPVKK HVERASHDPK VVITTYEGEH DHSMPPIRTI LPQTAGASVG ETESNGMSKS 300 KSEEGDTVHD AAITGKPEKG DSVDPITNEK ENNLAIVMRA EDAITGSTEQ KANHKAERSE 360 HNFQIAKEEI DQTVSKDQMV KQEKVASSHV DTKPEAILSE AKKPDTIVDM KPEVVSTEAK 420 KPDTIANKKP EVVSTEAKKP DTIVDMEVVS TEATKPDTII DMKPEIASTE AKRPDAIVES 480 SRAEAKSNGL QRPNTEAVNC *

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MVTQEENAVL VSPKDKLEQR LSPDSTINAS STDREAIVPE KPSEDGYNWR KYGQKNVKGN  60
EYIRSYYKCS HPNCQVKKQV ERSQDGRITD INYLGEHDHA KPHSDPQVSV PSLLSVKVQI  120
PDCPPAADED KPSDVQALAT GHFQKVDLCE HAIVKVADDA TPVPLTPSSQ SRDDHSENFT  180
LKRRKRSIDG GDNTAEKPSH ESRIVVHTVS EVDIVNDGFR WRKYGQKMVK GNPNPRSYYR  240
CSTTGCPVKK HVERASHDPK VVITTYEGEH DHSMPPIRTI LPQTAGASVG ETESNGMSKS  300
KSEEGDTVHD AAITGKPEKG DSVDPITNEK ENNLAIVMRA EDAITGSTEQ KANHKAERSE  360
HNFQIAKEEI DQTVSKDQMV KQEKVASSHV DTKPEAILSE AKKPDTIVDM KPEVVSTEAK  420
KPDTIANKKP EVVSTEAKKP DTIVDMEVVS TEATKPDTII DMKPEIASTE AKRPDAIVES  480
SRAEAKSNGL QRPNTEAVNC *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G04880.2	2e-75	WRKY family protein