PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015066-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 202aa    MW: 23795.4 Da    PI: 4.3607
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015066-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.81.2e-1596191199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     f+ ++ ps+v++  r ++p kf++++g  +e s ++ l+ +++ + W+v+l   k  + + l+kGW+ F +   L+ g f+ F++dg  + +++v
  AUR62015066-RA  96 FKVIMRPSYVSNGFRYRIPAKFVKKYG--EELSDEIYLNVPNSeQPWKVEL--HKENNVMSLGKGWQVFMEFYALEYGHFLAFRFDGGLQSHFHV 186
                     778899********************9..45899******555499*****..99999999*************************997777899 PP

                     EEE-S CS
              B3  95 kvfrk 99 
                      +f++
  AUR62015066-RA 187 LIFDN 191
                     99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MNYSIKRGDF LLFKYDERDS MFQLKIFDTT GFEIEYDHQQ VEQISSASEE EEMDLDDDDD  60
DDLSFSEDDD VAVHEPMDPT DVKSRLDAYK TKKPHFKVIM RPSYVSNGFR YRIPAKFVKK  120
YGEELSDEIY LNVPNSEQPW KVELHKENNV MSLGKGWQVF MEFYALEYGH FLAFRFDGGL  180
QSHFHVLIFD NRDYDNEAVK S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-13B3 family protein