PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015067-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 261aa    MW: 30669.4 Da    PI: 9.2646
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015067-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.48.3e-165881097
                    HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE CS
              B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvf 97
                    +++++ l++p +++++++++  +   ++l+  +gr+W+v+l   k +g+++ltkGW++ vk   Lk g  ++Fk+d++ s+f  ++++f
  AUR62015067-RA  5 STQNHKLRIPETYVKKYEEQLVN-DYVKLRVADGRVWRVEL--FKERGEVWLTKGWEKVVKCYSLKYGNLLLFKYDESdSTF--HITIF 88
                    556788***********655444.48***************..9*******************************9744555..99887 PP
2B356.93.9e-18162259899
                     -HHHHT..T-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-...TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   8 sdvlks..grlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvlt...kGWkeFvkangLkegDfvvFkldgrsefelv 93 
                      ++ ++   r+ +p +++++h  g++   +k+++l  ++ +s++v+l++  rk++++++l+    GW++Fv+ n+Lk gD +vF+l++r++  ++
  AUR62015067-RA 162 RSYISNklYRMAIPMSYLRKHlkGMD---EKEIILLGPDEKSYNVRLNVykRKTPKKIMLAelrFGWRNFVHGNKLKLGDACVFELVDRRSNMYK 253
                     3333332589***********86444...468***************766888888888876668**********************999999** PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v+vfr+
  AUR62015067-RA 254 VTVFRA 259
                     ****96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MVAPSTQNHK LRIPETYVKK YEEQLVNDYV KLRVADGRVW RVELFKERGE VWLTKGWEKV  60
VKCYSLKYGN LLLFKYDESD STFHITIFGM NGCEIEYDQV YHNYIKAQEI IEISSHDDEM  120
IAQDDQDTAI SPVVVAGDKT SVMERLEAFN SQNPHFKVIM RRSYISNKLY RMAIPMSYLR  180
KHLKGMDEKE IILLGPDEKS YNVRLNVYKR KTPKKIMLAE LRFGWRNFVH GNKLKLGDAC  240
VFELVDRRSN MYKVTVFRAD *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-18B3 family protein