PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015175-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ARF
Protein Properties Length: 877aa    MW: 97167.5 Da    PI: 6.2603
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015175-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.36.9e-24128229199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  AUR62015175-RA 128 FCKTLTASDTSTHGGFSVPRRAAEKVfppldytQLPPAQ--ELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFI--WNE 218
                     99******************************9999877..7************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  AUR62015175-RA 219 KNQLLLGIRRA 229
                     9999****997 PP
2Auxin_resp120.61.2e-39254337183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaast+s F+v++nPras+seFvv+++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k
  AUR62015175-RA 254 AAHAASTNSRFTVFFNPRASPSEFVVPLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 337
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 877 aa     Download sequence    
MRLSPSAFPH QPEEGEKKVL NSELWHACAG PLVSLPPVGS RVVYFPQGHS EQVAASTNKE  60
VDAHIPNYPS LPAQLICQLH DVTMHADVET DEVYAQMTLQ PLTLQEQKDV CLLPAELGTP  120
SKQPTNYFCK TLTASDTSTH GGFSVPRRAA EKVFPPLDYT QLPPAQELIA RDLHDNEWKF  180
RHIFRGQPKR HLLTTGWSVF VSAKRLVAGD SVIFIWNEKN QLLLGIRRAN RPQTVMPSSV  240
LSSDSMHIGL LAAAAHAAST NSRFTVFFNP RASPSEFVVP LAKYVKAVYH TRVSVGMRFR  300
MLFETEESSV RRYMGTITGI SDLDPVRWPN SHWRSVKVGW DESTAGERQP RVSLWEIEPL  360
TTFPMYPSPF PLRLKRPWPS GLPSFPVLKD GDMGLNSPLM WLQREVGDRC MSSLNFQGYG  420
LTPWMQPRLD PAMLGLQPDI FQTMASAALQ DPRGLEKRPN QSLLQFQPNQ NVSCQQSSLT  480
NHLLQQAQSQ QNLVPNFQEN QNVTHNQQLP HFEQLRSQFS DQQQIPKVIG NSKTPSFGSS  540
TQALPTSLEA ISSACSQQMF SNSIMNSVTA AGISPMHSLL NSFSHDGRSR QINIPVSNPL  600
VSSTPLLSKR VAVEPPQLSS STAPCSLPQV EELGGTQTRI SDLSSLLPPL PGREFSIYQG  660
IGDTQNNILF GVNAQQNELA NLRSSNNEND SLSMPFACSS FPSAAGTDFS PASDMMTASC  720
VDESGFLQSS ENDDQANPPS GTFVKVQKLG SLGRSLDISK FSSYHELRSE LAHLFGLEGQ  780
LEDPLRSGWQ LVFVDRENDV LLLGDDPWPE FVNNVGYIKI LSPQEVQQMG KDGLEFPNSI  840
SRPKHQNSFN SCDDYTLQQD LRHNSNGMAS VTSLDY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.20.0ARF family protein