PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015251-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 185aa    MW: 20701.2 Da    PI: 6.3929
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015251-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.53.9e-0766142290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +Y+eY+k+ GF v+ ++  ++         ++    +gkr + +++   +  +r+ ++++C+  l  ++++ g+w+v ++++ HnH++ 
  AUR62015251-RA  66 YYREYGKQEGFGVVCEAYGTT---------KYESVVNGKRVTVSHD---HLVKRKFKKCECHVVLYASMTEFGEWRVVNVNNSHNHTME 142
                     788888888888888876665.........4444556666665555...6778999******************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MEAENGGLRN IGWWEISGNG GGECSRQALS RSWENVGDED DGGCPMKMDA PAVGMVFSTL  60
EELYSYYREY GKQEGFGVVC EAYGTTKYES VVNGKRVTVS HDHLVKRKFK KCECHVVLYA  120
SMTEFGEWRV VNVNNSHNHT MEPKESNHIA MYKKDKINKA VEKRIDNDYG AGSSIPAIYN  180
NMAH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80010.11e-08FAR1 family protein