PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015520-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 249aa    MW: 28310.3 Da    PI: 6.311
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015520-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM178.22.2e-5571361129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPt+eelv++yL++kv ++++e+ ++ike+d+yk+ePwdL++ +k+   +++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++
  AUR62015520-RA   7 VPPGFRFHPTEEELVDYYLRRKVCSRRIEV-DIIKEIDLYKIEPWDLQELCKTgddDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAI 100
                     69****************************.99**************953333233556************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                     ++ k+ l+g++ktLvfykgrap+g+k+dW+mheyrle
  AUR62015520-RA 101 YC-KHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136
                     **.8899****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MNTSTQVPPG FRFHPTEEEL VDYYLRRKVC SRRIEVDIIK EIDLYKIEPW DLQELCKTGD  60
DDQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YCKHDLIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETDEN GAPQNSKMLL ASPHGTGTYN NTGLAPYDVL DQVTDWRVLD  180
KFVASQLSHE DVAKGHDNDN NNNNYSSSNV ASGIFPSAPI SDHSNKEDSL TDKTSTLTSS  240
SQIDVWKS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.13e-83NAC family protein