PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015597-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 242aa    MW: 26379.1 Da    PI: 6.5547
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015597-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.000446789123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C + F ++  L  H++ H
  AUR62015597-RA 67 FSCNYCRRKFFSSQALGGHQNAH 89
                    89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MAHPNISTKL EDESEEDDQE IGLRNPISLD LNLSFDPNNE SSHSNSGGGD DRVTGEEILP  60
PNNSRVFSCN YCRRKFFSSQ ALGGHQNAHK RERTIAKRAM RIGALADRHV SLASLPLHGS  120
LSSSPSSFQT RPSIDIQAHH GSMMMMMHPH LQPSSTTTVQ HQSHYNGYAH ILHHSEERLP  180
PHHGGGGDPA AKFEGQNGYL LGGVPVFSAV PFWPGSFRQV DDEAESSSAI TNSCPDLTLR  240
L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24625.18e-26C2H2 family protein