PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015684-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 133aa    MW: 14858.7 Da    PI: 4.486
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015684-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.51e-12331111898
                     --HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE- CS
              B3  18 lpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvfr 98 
                     +p + a  h ++ +++ t+tl+ +  +sW+ ++     + +r+ ++  WkeF+ +n+Lk+gD+++F+l+  + +  +l+v+v+r
  AUR62015684-RA  33 IPAESA--HILP-HKTATVTLT-RGKKSWKTTYFGsHPTHKRFDFS-SWKEFAVDNNLKVGDVCIFELIeLSgEALKLKVQVLR 111
                     555555..3223.344455543.467*******4466666778887.9*******************88433477788888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MNEEEQQLDP VSIDTEEDEE IEPLSGYPMF HTIPAESAHI LPHKTATVTL TRGKKSWKTT  60
YFGSHPTHKR FDFSSWKEFA VDNNLKVGDV CIFELIELSG EALKLKVQVL RGDFPSILLG  120
NDGTSDNPII VE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.17e-07B3 family protein