PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015992-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 284aa    MW: 31777.5 Da    PI: 7.9119
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015992-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding506.9e-161562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++l+d++ q+G g+W++++   g+ R +k+c++rw +yl
   AUR62015992-RA 15 KGLWSPEEDQRLKDYILQHGIGCWSSVPLNAGLQRNGKSCRLRWINYL 62
                     678*******************************************97 PP
2Myb_DNA-binding46.67.8e-1568113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg ++ +E+  ++ +++ lG++ W+ Ia++++ gRt++++k++w++yl
   AUR62015992-RA  68 RGMFSSQEEGMILTLHQTLGNK-WSQIAKHLP-GRTDNEIKNYWHSYL 113
                      7889******************.*********.************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MGLKSSEKLS KKHKKGLWSP EEDQRLKDYI LQHGIGCWSS VPLNAGLQRN GKSCRLRWIN  60
YLRPGLKRGM FSSQEEGMIL TLHQTLGNKW SQIAKHLPGR TDNEIKNYWH SYLKKRAGKS  120
ADTETNIAKH KFAICNTEEN GSCINQTSKD SRGELELLDG GEQVQGHENI LPRLVFADWL  180
SNDYTLGQNG LSYQQPTSVK NGFGFTAEKQ QGDFIHGFGY NEVASTSSSD MYSQEVGDVM  240
QKGMLDFPFK FQDQSALGSN FMDYSAGDGS YCGYYMSNSG IFS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25560.11e-58MYB family protein