PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016009-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HSF
Protein Properties Length: 238aa    MW: 26717.7 Da    PI: 5.381
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016009-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1192.6e-37291212103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y+++ed+++++++sw+++g+sfvv++++ fa+++Lp+yFkh+nf+SFvRQLn+YgF+kv  ++         weF+++sF++g+k+ll++
  AUR62016009-RA  29 FLTKTYQLVEDPSIDDVVSWNDDGSSFVVWNPTVFARDLLPRYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFSNESFRRGSKHLLCD 114
                     9*****************************************************************99.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i+r+k++
  AUR62016009-RA 115 IQRRKTT 121
                     ****975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MIPPAGDEHV GVCGGGSGGD SQRSIPTPFL TKTYQLVEDP SIDDVVSWND DGSSFVVWNP  60
TVFARDLLPR YFKHNNFSSF VRQLNTYGFR KVVPDRWEFS NESFRRGSKH LLCDIQRRKT  120
TAVVTVAQRQ VSPGHSGEEQ ALDLLPRKEL EGVRNSHDSD RPKIFGVPIG MKRGREEEGD  180
EDGGEGEGVV HVQGDMMETD IQIKCEPLDE NGVIDNQETP WLKQCHRHNQ RMGETVR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.12e-52HSF family protein