PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016072-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 197aa    MW: 22020.5 Da    PI: 4.5669
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016072-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH438.3e-1449101155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     +++ h+e+Er+RR ++ + ++ Lr+ lP+      ++K s ++ L +Av+YIk+L+
  AUR62016072-RA  49 KKAIHKEVERQRRLEMSNLYSSLRSTLPPeY---VKGKRSTSDHLAEAVNYIKDLE 101
                     5778*************************77...9******************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MFPFQRSGEL SFQTTEFVAE EEQIDAENQI YWLDGAPLNI EGNMNTANKK AIHKEVERQR  60
RLEMSNLYSS LRSTLPPEYV KGKRSTSDHL AEAVNYIKDL EKNIQELSDK RDQLKAAPES  120
PTSTYQVGSS SNPRPSLGSV EINPCLGGLD IDINAGYEDE SFTLSSALQV IFEEGLSVTS  180
CSSTKVNQRI IHKIVCE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12540.11e-36bHLH family protein