PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016155-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ARR-B
Protein Properties Length: 670aa    MW: 73349.4 Da    PI: 6.2738
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016155-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.38.1e-29213266155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl
  AUR62016155-RA 213 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 266
                     79*******************.********************************8 PP
2Myb_DNA-binding42.61.4e-13215265148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e+++++v av+qlG +   +k+I + m+  g+t++++ s++qky+
   AUR62016155-RA 215 RVVWSVELHQQFVAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 265
                      678***********************************************7 PP
3Response_reg79.89.4e-27371451109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl+vdD+p+ + +l+++l+  +y ev+ a ++e al++l+e++  +D+++ D+ mp+mdG++ll++   e  +lp+i+++a ++++ + + +  G
  AUR62016155-RA  37 VLVVDDDPTCLTILEKMLRTCRY-EVTKANKAEYALNMLRENKngFDVVISDVHMPDMDGFKLLEQVGLEM-DLPVIMMSADDSKQVVMKGVTHG 129
                     89*********************.***************999999**********************6644.8********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ +e+l +
  AUR62016155-RA 130 ACDYLIKPVRIEALKN 145
                     ************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 670 aa     Download sequence    
MNLGGGLMGS MAMTSSTISR KSSEVVTADQ FPVGLRVLVV DDDPTCLTIL EKMLRTCRYE  60
VTKANKAEYA LNMLRENKNG FDVVISDVHM PDMDGFKLLE QVGLEMDLPV IMMSADDSKQ  120
VVMKGVTHGA CDYLIKPVRI EALKNIWQHV VRKKKYEYKD VEQSGSWDEG DRQLKHDDAV  180
SSPANDGSWK NSKRKSGEDD EADDKDDTTT LKKPRVVWSV ELHQQFVAAV NQLGIDKAVP  240
KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVSQHQGG LNSSFMPQDP TFSTMSSLGG  300
IDLQTLAATG QLSAQTLAAY TRLPPTIKPG ISMPFVDQRN LFSFENSKLR YGDGQQSQIS  360
NVSKQMNLLH GIPTTMEPKQ LAGLNQSAQT LGSMNMQANA SSSHQSSSLL MQQMVPQQRG  420
HISNESISSQ VPRIQPSVGQ PLQSNGNANA VLSRNGMPYD PVNQSASVVD FSVNHIPELP  480
GNSFPLGSTP GITSITSKGF NQEEISSDIK VSRGFVGSYD MFSEIHHKPQ EWQMQNPNMG  540
FAGSSQHVPS VQSGVNVAPS IMVNQSYVSG QKNEQNGHSI AGKPMYSTGL ENQHVGMQNV  600
NQNYNSIHAN NSSRVKAETF SDVVNPGANL FDYSSDDMLS TIMLKQQEGI GSSTGDFDFD  660
GYTLDNIPV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-171ARR-B family protein