PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016200-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 258aa    MW: 29135.8 Da    PI: 4.0825
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016200-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM84.71.8e-2612114199
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                     lppG+rF+P  +el+++yLk+k++g +l++ + i+ev +i+ + P+dL +    + k+++k+wyfF++r++ky+ g+r+ +++++g+Wkatgkd+
  AUR62016200-RA  12 LPPGYRFEPYTKELINHYLKPKINGFDLPM-NPIHEVdNINVYGPEDLTArfipQGKGKSKSWYFFTSRNRKYHDGSRPDKKASDGFWKATGKDH 105
                     79****************************.88****779999*****8546666666888********************************** PP

             NAM  91 evlskkgel 99 
                     ++++ + + 
  AUR62016200-RA 106 PIIDDDAAS 114
                     **9964433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MEEKPGESFN NLPPGYRFEP YTKELINHYL KPKINGFDLP MNPIHEVDNI NVYGPEDLTA  60
RFIPQGKGKS KSWYFFTSRN RKYHDGSRPD KKASDGFWKA TGKDHPIIDD DAASSATTIM  120
MAWLTTNNNL ISYDNNDGLV NRSNLISYDN NNDGLVNNSN LISYDNNIDG LVNSSNLISY  180
DNNDDGLVNS SNLISYDNND GLVNSNNLIS YDDDGLNNSI YGDLQDLVPD FDSLYDKIMT  240
EVLFDQIDFT NWALDFF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03200.16e-22NAC family protein