PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62016321-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 622aa MW: 72149.6 Da PI: 4.7029

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62016321-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.2	2.1e-21	145	228	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAke+GF +r+++s ++++++e + ++C++eg+++ ++ + +r+etrtgC a++++++ ++++w++++++leHnH + AUR62016321-RA 145 NYYNCYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTFKEAT-----CRRKETRTGCLAMIRLRLVESNRWRIDEVKLEHNHLF 228 69**************************************98877.....999******************************77 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
MDENSPNSED LIDEIEDQED DGDEIFENEG LDHESDGHHG FGIEGDHEND GEQFFIDASI 60 HEESEQGIEL EGEDHCSDGQ QFLEVRDHIA DNDTFQVLNL HCNGEENNLG NNTVGVDDED 120 SSSKEKYYHP PVVGMEFESY DDAYNYYNCY AKELGFAIRV KSSWTKRNSK EKRGAVLCCN 180 CEGFKTFKEA TCRRKETRTG CLAMIRLRLV ESNRWRIDEV KLEHNHLFDP ERVQNSKSHK 240 KIEVGLKRDL EPTVDVEVRT IKLYRTSAVD AASSWNLTTM QTENDRFRAI QSAISEVFPR 300 AHHRFCLPLV MQNIFQNLGQ MEEFEAFQSF LNGTVYNSLK IDEFETSWDN MIQRFGIKEH 360 KWLQIWYEDR EKWAPVYQKD TFLAGLFAVQ AGESSLFFAG HIHERTSVKE FFDLYDVIIE 420 KKRLKEALDD LESGGSNLLL RTRCYYELQL SKFYTKQIFE KFQVEVEMMS CCVTINQVHT 480 SGPVTTYVVK ECENGGIKEL RNFEVMYDKA AFEVRCVCGG FYLNGYLCRH ALSVLNLNGV 540 EEIPFSYILQ RWRKDCKHLY VPDIGSNAID ISNPTQWYDH LHKRAMQVVE AGMVSQDHYM 600 VAWQAFLESL NKVRLTEEKN L*

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

MDENSPNSED LIDEIEDQED DGDEIFENEG LDHESDGHHG FGIEGDHEND GEQFFIDASI  60
HEESEQGIEL EGEDHCSDGQ QFLEVRDHIA DNDTFQVLNL HCNGEENNLG NNTVGVDDED  120
SSSKEKYYHP PVVGMEFESY DDAYNYYNCY AKELGFAIRV KSSWTKRNSK EKRGAVLCCN  180
CEGFKTFKEA TCRRKETRTG CLAMIRLRLV ESNRWRIDEV KLEHNHLFDP ERVQNSKSHK  240
KIEVGLKRDL EPTVDVEVRT IKLYRTSAVD AASSWNLTTM QTENDRFRAI QSAISEVFPR  300
AHHRFCLPLV MQNIFQNLGQ MEEFEAFQSF LNGTVYNSLK IDEFETSWDN MIQRFGIKEH  360
KWLQIWYEDR EKWAPVYQKD TFLAGLFAVQ AGESSLFFAG HIHERTSVKE FFDLYDVIIE  420
KKRLKEALDD LESGGSNLLL RTRCYYELQL SKFYTKQIFE KFQVEVEMMS CCVTINQVHT  480
SGPVTTYVVK ECENGGIKEL RNFEVMYDKA AFEVRCVCGG FYLNGYLCRH ALSVLNLNGV  540
EEIPFSYILQ RWRKDCKHLY VPDIGSNAID ISNPTQWYDH LHKRAMQVVE AGMVSQDHYM  600
VAWQAFLESL NKVRLTEEKN L*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-106	FAR1 family protein