PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016352-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 183aa    MW: 20609.7 Da    PI: 10.6906
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016352-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43.1e-17856153
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                    ++++GVr+++ +g WvAeIr+p        +r++lg+f +aeeAa+ +++a+  +
  AUR62016352-RA  8 KKFRGVRQRH-WGAWVAEIRHP-----LlkRRIWLGTFKSAEEAARTYDEAAVLM 56
                    59*******9.**********8.....334*********************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MGLLHSTKKF RGVRQRHWGA WVAEIRHPLL KRRIWLGTFK SAEEAARTYD EAAVLMSGRK  60
AKTNFPVTTK IGSSNEIITS RPSKEPLSKS HPNASVSSLL NSKLRKSYQK LCPSLTCLRL  120
DTENSNIRVW QKRSIGGQPN SSWVMTVKFD AKNNVEAQEI KGGISEEEKI ALQMIEELLN  180
NY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.19e-56ERF family protein