PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016376-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C3H
Protein Properties Length: 141aa    MW: 15332.1 Da    PI: 9.4532
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016376-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH34.92.7e-112348126
                    --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                    y+ +lCr+f+ tG C+yGd+C+F+H 
  AUR62016376-RA 23 YRKALCRTFQSTGNCHYGDTCPFSHN 48
                    8899*********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MAERPSEAPV PANRGSVADK YKYRKALCRT FQSTGNCHYG DTCPFSHNTC KFNFKSRCPY  60
GSSSSAPVLA SESGNAQTAP KTLVNAEVQN PLKLTGSKHE MSPREVSTFK WKRSKKYVGI  120
YADWIDEESS VPGSASGSQQ *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35430.18e-06C3H family protein