PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62016510-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 105aa MW: 11335.8 Da PI: 10.0709

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62016510-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.6	6e-05	29	67	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq AUR62016510-RA 29 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 67 6678889999999999998.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 105 aa Download sequence
CNSTATTTGG VPPKKPRVQS SSTPPLKVRK EKLGDRITAL HQLVSPFGKT DTASVLLEAI 60 GYIRFLQGQI EALSSPYLGN NNATTKNQHT VHGERNCLFP DHPGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	1e-37	bHLH family protein