PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016545-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 233aa    MW: 26032.1 Da    PI: 7.5587
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016545-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.21.9e-08117157451
             AP2   4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                     +GV+++  +++W A I++      + +++lg+  + eeAa ++++a+ 
  AUR62016545-RA 117 TGVYFK--NKKWQAAIKVD-----KIQIHLGTVSSQEEAAHLYDRAAF 157
                     7**994..68********4.....4********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MVSLRRRRLL GLCNGSSTDE NASENATYSS NSASVYPITF NDLNLRAEEG SDPLEEIMEP  60
VTINDSGSSK DKHIQPSIVS STLSKELDTQ RTVEIEVKRR KQHRRRRIHS EEQCAMTGVY  120
FKNKKWQAAI KVDKIQIHLG TVSSQEEAAH LYDRAAFMCG REPNFELAEE EKQQLRKLKW  180
SEFLAMTRSA ISNKKSRRGR VTGKAAPLLQ NSDEGEQGAE ASSASDDAIL DS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198124KRRKQHRRRRIHSEEQCAMTGVYFKNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.12e-41ERF family protein