PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016606-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 205aa    MW: 22792.9 Da    PI: 10.7902
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016606-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.11.7e-2176126155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+GVr ++ +grW AeIrd +   g r r++lg+f+t+eeAa+a++aa+++l+g
  AUR62016606-RA  76 KKYRGVRKRP-WGRWSAEIRDrV---G-RCRHWLGTFDTPEEAARAYDAAARRLRG 126
                     59********.**********55...2.59************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
LSPVLEGIAV VVGQHVLFGT TPTTKPTTCK EAKVEVSNPN PNAPKRFESE NERKNVSEKQ  60
SNPKAKRFET STGVEKKYRG VRKRPWGRWS AEIRDRVGRC RHWLGTFDTP EEAARAYDAA  120
ARRLRGSKAK TNFQVPSVVP TSTSTTLSPT SSSSSSSYEF IKNINNPTTT TMYKKKCQVV  180
TSMSQLVTKN RFMELIDLNV GVHK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.11e-22ERF family protein