PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016620-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 171aa    MW: 19653.4 Da    PI: 8.4093
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016620-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.26.2e-1887168188
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k +++s+v+   +l++p +f++ h  +  e+ ++tl de+g +W+ k+  rk++    l++GW++F  +++L +gD +vF+l++ +
  AUR62016620-RA  87 FIKPMLQSHVTGGFWLSFPIPFCKVHLPD--EDEMVTLVDEDGDEWKAKYLARKNG----LSGGWRGFSIDHELVDGDALVFQLIEPT 168
                     89*********************999433..4559***************667776....***********************98754 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MIQAKKVKAR STDFGVSSVR RSSRTADKPP PNYKEYAMEP MSEGRRIYKY KRRDILNRVY  60
ASDKDRVYAI ERAEELEQQL GSAFPAFIKP MLQSHVTGGF WLSFPIPFCK VHLPDEDEMV  120
TLVDEDGDEW KAKYLARKNG LSGGWRGFSI DHELVDGDAL VFQLIEPTTF K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-67B3 family protein