PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016741-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 83aa    MW: 9200.27 Da    PI: 8.966
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016741-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.44.6e-101461348
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqkyl 48
                     +WT+   + + +a + + ++   +W+ Iar +g g+t++++k ++ ++l
   AUR62016741-RA 14 SWTAKQNKAFERALAVYDKEtpdRWHNIARAVG-GKTAEEVKRHYEDLL 61
                     7*****************99*************.***********8875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    
MATGSMSSRG MGSSWTAKQN KAFERALAVY DKETPDRWHN IARAVGGKTA EEVKRHYEDL  60
LEDIKNIESG QVPFPNYKNI GN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.16e-36MYB_related family protein