PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016794-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family SRS
Protein Properties Length: 247aa    MW: 26764.4 Da    PI: 4.5963
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016794-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70272.21.5e-2210917885153
          DUF702  85 alsstkl.ssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
                     + +s+++ ++    + le  ++P+ev+s+a frc+rvss d+  +++aYqt+++igGhvfkG+L dqG+ 
  AUR62016794-RA 109 SKKSARVfTRPGCVRGLEGGNFPAEVNSSATFRCIRVSSEDNVVDQYAYQTSITIGGHVFKGVLNDQGPT 178
                     222222202333455677778***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MEEIVNMEYF WQAGDDDGAK EDDEENEPTN DVIKNLDYDG MKCSRVSDLG QNHDVDLSKF  60
GDDYHEKPDV FFEFSDGSNL NFHGYVHDAA ADDRMIKSGK NSFGKMAKSK KSARVFTRPG  120
CVRGLEGGNF PAEVNSSATF RCIRVSSEDN VVDQYAYQTS ITIGGHVFKG VLNDQGPTTA  180
RRGGEASSIA TSDHLPFNIT GTATSMAGGA NIYHPPSLYS APSFNAFLPA LPSGFLCSQI  240
ANLDTK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66350.13e-20SRS family protein