PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016816-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 329aa    MW: 36321.7 Da    PI: 6.0602
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016816-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.72.1e-20247280134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs+C++tkTp+WR gp+g+ktLCnaCG+++++ +
  AUR62016816-RA 247 CSHCQVTKTPQWRAGPNGPKTLCNACGVRFKSGR 280
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MECMEARALK SSFSSELAMK TSNQQSIFDD IWCVAGLPSD DFSIDEFFDL PNEENIDGSS  60
LLEEEEEKDS SSFSLSSHDP VDDSNDNSTN FSPDLAIPVD DVQELELWSH LMDDSVPEPT  120
LACPNPILDA QKNKTGFNFM NRVEPVSKPA FYRISCIPNP SAVPVKPRSK RSRSTGNRSW  180
VFNSPSKTDS SSSSSPTSSP VSTLFFPPTV QDMGVLFNFG KPPMKRPKKK PMVNSPAGEN  240
PPVQRRCSHC QVTKTPQWRA GPNGPKTLCN ACGVRFKSGR LFPEYRPACS PTFSSEVHSN  300
SHRKVLEMRK RKETTESITG LAQTILSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34680.25e-46GATA family protein