PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62017023-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 172aa    MW: 19242.8 Da    PI: 9.4726
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62017023-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH201.2e-061463455
                    HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                      + +E+ RR+ ++  ++eL +llP  +    s      +    A+++Ik+Lq
  AUR62017023-RA 14 DRKTVEKERRNTLKILYSELNSLLPRnD---ASSPKAIPDQIDDATNFIKQLQ 63
                    56889*********************66...5555666799999******998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MISNSAKSSS TKRDRKTVEK ERRNTLKILY SELNSLLPRN DASSPKAIPD QIDDATNFIK  60
QLQTNIENLK QTKDRRVSSS RTSYYSKNSP VQIEVRVNGS ALVVTLVTGL ECQFVFTEAI  120
RIFHEENAEV VNANYCVTGN IVLHTIHAQI GEAATTDTVA RITERLKKFE L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.14e-32bHLH family protein